ordering.improve

<p>The permutation (ordering) to start from.</p>

ordering

<p>Improve the ordering in the sense that some function is
maximised.</p>

Implements the DeLorean model (Reid & Wernisch (2016)
<doi:10.1093/bioinformatics/btw372>) to estimate pseudotimes for
single cell expression data. The DeLorean model uses a Gaussian process
latent variable model to model uncertainty in the capture time of
cross-sectional data.

John Reid

ordering.improve: Improve the ordering in the sense that some function is maximised.

Description

Usage

Arguments