single_pubmed_search

Perform a PubMed search for a given gene and term.

Designed for genomic and proteomic data analysis, enabling unbiased PubMed searching, protein interaction network visualization, and comprehensive data summarization. This package aims to help users identify novel targets within their data sets based on protein network interactions and publication precedence of target's association with research context based on literature precedence. Methods in this package are described in detail in: Douglas (Year) <to-be-added DOI or link to the preprint>. Key functionalities of this package also leverage methodologies from previous works, such as:
- Szklarczyk et al. (2023) <doi:10.1093/nar/gkac1000>
- Winter (2017) <doi:10.32614/RJ-2017-066>.

Cameron Douglas

DeSciDe

Tool for Unbiased Literature Searching and Gene List Curation

single_pubmed_search function

<dl><dt>gene</dt>
<dd>A character string representing the gene symbol.</dd>
<dt>term</dt>
<dd>A character string representing the search term.</dd></dl>

Arguments

Search PubMed — single_pubmed_search

<dl>

<dt>gene</dt>
<dd>A character string representing the gene symbol.</dd>


<dt>term</dt>
<dd>A character string representing the search term.</dd>

</dl>

single_pubmed_search: Search PubMed

Description

Usage

Value

Arguments

Examples