decon.bootstrap

data.set

a data frame providing the expression values from pure tissue samples

possible.signatures

the number of genes/transcripts used for estimation of proportions from our deconvolution

n.sig

the number of bootstraps for our deconvolution

n.iter


       A function is used to estimate the the confidence interval for the proportions predicted by deconvolution through bootstrapping.


DeconSeq is an R package for deconvolution of
heterogeneous tissues based on mRNA-Seq data. It modeled
expression levels from heterogeneous cell populations in
mRNA-Seq as the weighted average of expression from different
constituting cell types and predicted cell type proportions of
single expression profiles.

Ting Gong

DeconRNASeq

Deconvolution of Heterogeneous Tissue Samples for mRNA-Seq data

decon.bootstrap function

A function is used to estimate the the confidence interval for the proportions predicted by deconvolution through bootstrapping.

decon.bootstrap: Estimate the confidence interval for the proportions predicted by deconvolution

Description

Usage

Arguments

Value

References