rmse

estimated proportions from our deconvolution


       A function is used to calculate the root-mean-square error (RMSE) for the accurracy of estimated proportions.


DeconSeq is an R package for deconvolution of
heterogeneous tissues based on mRNA-Seq data. It modeled
expression levels from heterogeneous cell populations in
mRNA-Seq as the weighted average of expression from different
constituting cell types and predicted cell type proportions of
single expression profiles.

Ting Gong

DeconRNASeq

Deconvolution of Heterogeneous Tissue Samples for mRNA-Seq data

rmse function

A function is used to calculate the root-mean-square error (RMSE) for the accurracy of estimated proportions.

rmse: Calculate the differences between proportions predicted by deconvolution and the values actually measured

Description

Usage

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Value

References