getPWM
From DepLogo v1.0
by Jan Grau
Position weight matrix from DLData object
Determines the position weight matrix from a DLData object as relative frequency of symbols in each column of the data slot.
Usage
getPWM(part)Arguments
- part
the DLData object
Value
The position weight matrix, where columns correspond to positions (columns of the DLData$data slot) and rows to symbols.
Examples
# NOT RUN {
data <- DLData(c("ACGT", "ATTA"))
getPWM(data)
# }
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