suggestColors

0th

Percentile

Suggest colors for symbols

Suggests colors for the symbols in data based on the co-occurrence of symbols at common positions, weighted by the dependency values at those positions. The idea is to assign similar colors only to symbols that either mostly occur at different positions or that are present at positions with low inter-dependencies to other positions.

Usage
suggestColors(data)
Arguments
data

the data

Value

the colors

See Also

replaceColors

Aliases
  • suggestColors
Examples
# NOT RUN {
# read data and create DLData object
seqs <- read.table(system.file("extdata", "cjun.txt", package = "DepLogo"), 
    stringsAsFactors = FALSE)
data <- DLData(sequences = seqs[, 1] ,weights = log1p(seqs[, 2]) )

suggestColors(data)
# }
Documentation reproduced from package DepLogo, version 1.0, License: GPL-3

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