DescTools v0.99.18

0

Monthly downloads

0th

Percentile

by Andri Signorell

Tools for Descriptive Statistics

A collection of miscellaneous basic statistic functions and convenience wrappers for efficiently describing data. The author's intention was to create a toolbox, which facilitates the (notoriously time consuming) first descriptive tasks in data analysis, consisting of calculating descriptive statistics, drawing graphical summaries and reporting the results. The package contains furthermore functions to produce documents using MS Word (or PowerPoint) and functions to import data from Excel. Many of the included functions can be found scattered in other packages and other sources written partly by Titans of R. The reason for collecting them here, was primarily to have them consolidated in ONE instead of dozens of packages (which themselves might depend on other packages which are not needed at all), and to provide a common and consistent interface as far as function and arguments naming, NA handling, recycling rules etc. are concerned. Google style guides were used as naming rules (in absence of convincing alternatives). The 'camel style' was consequently applied to functions borrowed from contributed R packages as well.

Functions in DescTools

Name Description
AndersonDarlingTest Anderson-Darling Test of Goodness-of-Fit
Between, Outside Operators To Check, If a Value Lies Within Or Outside a Given Range
axTicks.POSIXct Compute Axis Tickmark Locations (For POSIXct Axis)
Assocs Association Measures
Atkinson Calculate the Atkinson Index
AUC Area Under the Curve
Benford Benford's Distribution
AxisBreak Place a Break Mark on an Axis
BartelsRankTest Bartels Rank Test
AscToChar Convert ASCII Codes to Characters and Vice Versa
BinomDiffCI Confidence Interval for a Difference of Binomials
Asp Aspect Ratio
BoxedText Add Text in a Box to a Plot
BoxCoxLambda Automatic Selection of Box Cox Transformation Parameter
BoxCox Box Cox Transformation
BinToDec Converts numbers from binmode, octmode or hexmode to decimal and vice versa
BreuschGodfreyTest Breusch-Godfrey Test
BrierScore Brier Score
BinomCI Confidence Intervals for Binomial Proportions
BreslowDayTest Breslow-Day Test for Homogeneity of the Odds Ratios
CCC Concordance Correlation Coefficient
BinTree Binary Tree
BubbleLegend Add a Legend to a Bubble Plot
ChooseColorDlg Display Color Dialog to Choose a Color
Closest Find the Closest Value
Canvas Canvas for Geometric Plotting
CartToPol Transform Cartesian to Polar/Spherical Coordinates and vice versa
Coalesce Return the First Element Not Being NA
CatTable Function to write a table
ClipToVect Reformat a Table in the Clipboard as Vector
Clockwise Calculates Begin and End Angle From a List of Given Angles in Clockwise Mode
ColToHex Convert a Color into Hex String
CollapseTable Collapse Levels of a Table
CohenD Cohen's Effect Size
ColToGrey Convert Colors to Grey/Grayscale
ColToHsv R Color to HSV Conversion
ColToRgb Color to RGB Conversion
ColorLegend Add a ColorLegend to a Plot
ColPicker Plot All Named R Colors
CochranArmitageTest Cochran-Armitage test for trend
CochranQTest Cochran's Q test
CorPart Find the Correlations for a Set x of Variables With Set y Removed
CombPairs Get All Pairs out of one or two Sets of Elements
ColumnWrap ColumnWrap
CorPolychor Polychoric Correlation
Contrasts Pairwise Contrasts
ConDisPairs Concordant and Discordant Pairs
ConnLines Add Connection Lines to a Barplot
Association measures Cramer's V, Pearson's Contingency Coefficient and Phi Coefficient Yule's Q and Y, Tschuprow's T
CronbachAlpha Cronbach's Coefficient Alpha
Cstat C Statistic (Area Under the ROC Curve)
DoCall Fast Alternative To The Internal do.call
CutQ Create a Factor Variable Using the Quantiles of a Continuous Variable
DrawBand Draw Confidence Band
DrawBezier Draw a Bezier Curve
DrawArc Draw Elliptic or Circular Arc(s)
FileOpenCmd Get Path of a Data File to Be Opened
FindColor Get Color on a Defined Color Range
DescToolsOptions DescTools Options
DigitSum Calculate Digit Sum
DurbinWatsonTest Durbin-Watson Test
Entropy Shannon Entropy and Mutual Information
ErrBars Add Error Bars to an Existing Plot
Eps Greenhouse-Geisser And Huynh-Feldt Epsilons
GCD, LCM Greatest Common Divisor and Least Common Multiple
KendallTauB Kendall Tau-b
GeomTrans Geometric Transformations
KendallW Kendall's Coefficient of Concordance W
Agree Raw Simple And Extended Percentage Agreement
AddMonthsYM Add a Month to a Date
d.whisky Classification of Scotch Single Malts
Desc Describe Data
Datasets for Simulation Datasets for Probabilistic Simulation
DunnettTest Dunnett's Test for Comparing Several Treatments With a Control
DenseRank Dense Ranks
FindCorr Determine highly correlated variables
DunnTest Dunn's Test of Multiple Comparisons
FixToTab Text to Table
Cor Correlation, Variance and Covariance (Matrices)
AllDuplicated Index Vector of All Values Involved in Ties
d.periodic Periodic Table of Elements
DivCoef Rao's diversity coefficient also called quadratic entropy
d.pizza Data pizza
DivCoefMax Maximal value of Rao's diversity coefficient also called quadratic entropy
Dummy Generate Dummy Codes for a Factor
DrawRegPolygon Draw Regular Polygon(s)
Factorize Prime Factorization of Integers
ExpFreq Expected frequencies
Abstract Abstract
Abind Combine Multidimensional Arrays
Date Functions Basic Date Functions
Date Create a Date from Numeric Representation
DrawCircle Draw a Circle
EtaSq Effect size calculations for ANOVAs
DrawEllipse Draw an Ellipse
Exec Execute a Command Given As String
GetNewPP Create a new PowerPoint Instance
GTest G-Test for Count Data
HexToCol Identify closest match to a color given by a hexadecimal string
HWZdata Get HWZ Datasets
ICC Intraclass Correlations (ICC1, ICC2, ICC3 From Shrout and Fleiss)
IsDichotomous Test If a Variable Contains Only Two Unique Values
IsDate Check if an Object is of Type Date
median.factor Median for Ordered Factors
MeanDiffCI Confidence Interval For Difference of Means
MoveAvg Moving Average
MosesTest Moses Test of Extreme Reactions
Gini Gini Coefficient
GetNewXL Create a new Excel Instance
HexToRgb Convert a Hexstring Color to a Matrix With Three Red/Green/Blue Rows
Hmean Harmonic Mean and Its Confidence Interval
InDots Is a Specific Argument in the Dots-Arguments?
ImportFileDlg Import File In Foreign Format
IsEuclid Is a Distance Matrix Euclidean?
Keywords List Keywords For R Manual Pages
IsOdd Checks If An Integer Is Even Or Odd
Label, Unit Label, Unit Attribute of an Object
AddClass Add and Remove Classes From an Object
AddMonths Add a Month to a Date
d.countries ISO 3166-1 Country Codes
d.diamonds Data diamonds
FctArgs Retrieve a Function's Arguments
day.name Build-in Constants Extension
DegToRad Convert Degrees to Radians and vice versa
Fibonacci Fibonacci Numbers
Frac Fractional Part and Maximal Digits of a Numeric Value
Freq Frequency Table
HmsToSec Convert h:m:s To/From Seconds
HodgesLehmann Hodges-Lehmann Estimator of Location
HotellingsT2Test Hotelling's T2 Test
HuberM Safe (generalized) Huber M-Estimator of Location
KappaM Kappa for m raters
GetNewWrd Create a new Word Instance
Lc Lorenz Curve
KendallTauA Kendall's Tau-a
GoodmanKruskalGamma Goodman Kruskal's Gamma
GoodmanKruskalTau Goodman Kruskal's Tau
HoeffD Matrix of Hoeffding's D Statistics
HosmerLemeshowTest Hosmer-Lemeshow Goodness of Fit Tests
Some numeric checks Check a Vector For Being Numeric, Zero Or a Whole Number
LogSt Started Logarithmic Transformation and Its Inverse
Lookup Look Up a Value In a Reference Vector
%nin% Find Matching (or Non-Matching) Elements
MedianCI Confidence Interval for the Median
Median Median Value
PartitionBy PartitionBy Evaluates a Function Groupwise
OddsRatio Odds Ratio Estimation and Confidence Intervals
lines.lm Add a Linear Regression Line
MHChisqTest Mantel-Haenszel Chi-Square Test
lines.loess Add a Loess or a Spline Smoother
PoissonCI Poisson Confidence Interval
Midx Find the Midpoints of a Numeric Vector
Rename Change Names of a Named Object
PolarGrid Plot a Grid in Polar Coordinates
reorder.factor Reorder the Levels of a Factor
Rotate Rotate a Geometric Structure
PasswordDlg Password Dialog
Permn Number and Samples for Permutations or Combinations of a Set
PlotACF Combined Plot of a Time Series and its ACF and PACF
PlotDot Cleveland's Dot Plots
PlotECDF Empirical Cumulative Distribution Function
PlotMatrix Scatterplot Matrix
JarqueBeraTest (Robust) Jarque Bera Test
PlotMiss Plot Missing Data
Lambda Goodman Kruskal Lambda
Extremes Kth Smallest/Largest Values
LOCF Last Observation Carried Forward
LOF Local Outlier Factor
MeanAD Mean Absolute Deviation From a Center Point
MeanCI Confidence Interval for the Mean
RoundTo Round to Multiple
Measures of Shape Skewness and Kurtosis
SignTest Sign Test
SysInfo System Information
StrPos Find Position of First Occurrence Of a String
StrPad Pad a String With Justification
TextContrastColor Choose Textcolor Depending on Background Color
ToLong, ToWide Reshape a Vector From Long to Wide Shape Or Vice Versa
PostHocTest Post-Hoc Tests
power.chisq.test Power Calculations for ChiSquared Tests
Recycle Recyle a List of Elements
RndPairs Create Pairs of Correlated Random Numbers
RelRisk Relative Risk
RgbToCol Find the Named R-Color Which Is Nearest to a Given RGB-Color
SetRowNames Set the Row Names and Column Names in an Object
Shade Produce a Shaded Curve
LehmacherTest Lehmacher's Test for Marginal Homogenity
Logit Generalized Logit and Inverse Logit function
LogLin Log Linear Hybrid, Generalized Log
Mar Set Plot Margins
ORToRelRisk Transform Odds Ratio to Relative Risk
Mean Arithmetic Mean
ToWrd Send Objects to Word
Outlier Outlier
WrdFormatCells Format Cells Of a Word Table
WrdInsertBookmark Insert a Bookmark, Goto Bookmark and Update the Text of a Bookmark
XLView Use Excel as Viewer for a Data.Frame
Xplore Interactive Graphical Data Explorer
YuenTTest Yuen t-Test For Trimmed Means
ZeroIfNA Replace NAs by 0
SortMixed Order or Sort Strings With Embedded Numbers So That The Numbers Are In The Correct Order
Sort Sort a Vector, a Matrix, a Table or a Data.frame
StrCap Capitalize the First Letter of a String
Strata Stratified sampling
StuartTauC Stuart $Tau C$
StuartMaxwellTest Stuart-Maxwell Marginal Homogeneity Test
Untable Recover Original Data From Contingency Table
VarCI Confidence Interval for the Variance
PairApply Pairwise Calculations
DescTools Palettes Some Custom Palettes
PearsonTest Pearson chi-square test for normality
PlotMarDens Scatterplot with Marginal Densities
PercTable Percentage Table
PlotLog Logarithmic Plot
PlotPch Information plots
PlotMultiDens Plot Multiple Density Curves
PlotArea Create an Area Plot
PlotBag PlotBag, a bivariate boxplot
PlotCirc Plot Circular Plot
PlotCorr Plot a Correlation Matrix
PlotQQ QQ-Plot for Any Distribution
PlotTernary Ternary or Triangular Plots.
ScheffeTest Scheffe Test for Pairwise and Otherwise Comparisons
pRevGumbel "Reverse" Gumbel Distribution Functions
Rev Reverse Elements of a Vector or the Rows/Columns of Matrices and Tables
SD Standard Deviation
WoolfTest Woolf Test
WrdCaption Insert Caption to Word
XLDateToPOSIXct Convert Excel Dates to POSIXct
XLGetRange Import Data Directly From Excel
PpPlot Add Slides, Insert Texts and Plots to PowerPoint
StrAbbr String Abbreviation
Primes Find all Primes Less Than n
StrTrunc Truncate Strings and Add Ellipses If a String is Truncated.
StrVal Extract All Numeric Values From a String
StrAlign String Alignment
TMod Comparison Table For Linear Models
TOne Create Table One Describing Baseline Characteristics
VIF Variance Inflation Factors
Vigenere Vigenere Cypher
WrdParagraphFormat Get or Set the Paragraph Format in Word
WrdMergeCells Merges Cells Of a Defined Word Table Range
ZTest Z Test for Known Population Standard Deviation
Zodiac Calculate the Zodiac of a Date
NemenyiTest Nemenyi Test
MultinomCI Confidence Intervals for Multinomial Proportions
%overlaps% Determines If And How Extensively Two Date Ranges Overlap
PageTest Exact Page Test for Ordered Alternatives
%c% Concatenates two strings without any separator.
PDFManual Get PDF Manual Of a Package From CRAN
Arrow Insert an Arrow
Gmean Geometric Mean and Standard Deviation
as.matrix.xtabs Convert xtabs To matrix
GiniSimpson Compute Gini-Simpson Coefficient
identify.formula Identify Points In a Plot Using a Formula.
IdentifyA Identify Points in Plot Lying within a Rectangle or Polygon
IsPrime IsPrime Property
IsValidWrd Check Word Pointer
LeveneTest Levene's Test for Homogeneity of Variance
%like% Like operator
SelectVarDlg Select Elements of a Set by Click
SpreadOut Spread Out a Vector of Numbers To a Minimum Interval
SetAlpha Add an Alpha Channel To a Color
StrRep Repeat the Elements of a Character Vector
SplitPath Split Path In Drive, Path, Filename
StrRev Reverse a String
StrLeft, StrRight Returns the Left Or the Right Part Of a String
PlotFaces Chernoff Faces
PlotFdist Frequency Distribution Plot
PlotPolar Plot Values on a Circular Grid
PlotPyramid Draw a Back To Back Pyramid Plot
PlotTreemap Create a Treemap
PseudoR2 Pseudo R2 Statistics
PlotVenn Plot a Venn Diagram
PtInPoly Point in Polygon
RobScale Robust Scaling With Median and Mad
RomanToInt Convert Roman Numerals to Integers
ShapiroFranciaTest Shapiro-Francia test for normality
SiegelTukeyTest Siegel-Tukey Test For Equality In Variability
SpearmanRho Spearman Rank Correlation
StrChop Split a String in a Number of Pieces With Fixed Length
split.formula Formula Interface for Split
Trim Trim a Vector
TukeyBiweight Calculate Tukey's Biweight Robust Mean
StrDist Compute Distances Between Strings
WrdTable Insert a Table in a Word Document
WrdTableBorders Draw Borders to a Word Table
LineToUser Convert Line Coordinates To User Coordinates
LinScale Perform a linear scaling of x
List Variety Of Objects List Objects, Functions Or Data in a Package
Measures of Accuracy Measures of Accuracy
ParseFormula Parse a Formula and Create a Model Frame
MixColor Compute the convex combination of two colors
ParseSASDatalines Parse a SAS Dataline Command
Mode Mode
PlotBubble Draw a Bubble Plot
PlotCandlestick Plot Candlestick Chart
PlotFun Plot a Function
PlotLinesA Plot Lines
PlotMonth Plot Monthly or Seasonal Effects Of a Univariate Time Series
PlotMosaic Mosaic Plots
Range (Robust) Range
PlotViolin Plot Violins Instead of Boxplots
Recode Recode a Factor
PlotWeb Plot a Web of Connected Points
SampleTwins Sample Twins
SaveAsDlg Save R Objects By Choosing a File Interactively
SmoothSpline Formula Interface For smooth.spline
Some Return Some Randomly Chosen Elements of an Object
Stamp Date/Time/Directory Stamp the Current Plot
Str Compactly Display the Structure of an Arbitrary R Object
TextToTable Converts String To a Table
StrExtract Extract Part of a String
TheilU Theil's U index of inequality
StrIsNumeric Does a String Contain Only Numeric Data
Winsorize Winsorize
wdConst Word VBA constants
WrdStyle Get or Set the Style in Word
WrdPlot Insert Active Plot to Word
StrTrim Remove Leading/Trailing Whitespace From A String
VarTest ChiSquare Test for One Variance and F Test to Compare Two Variances
WrdFont Get or Set the Font in Word
VecRot Vector Rotation
WrdCellRange Return the Cell Range Of a Word Table
No Results!

Last month downloads

Details

Type Package
Date 2016-11-04
LinkingTo Rcpp, BH
License GPL (>= 2)
LazyLoad yes
LazyData yes
ByteCompile yes
NeedsCompilation yes
Additional_repositories http://www.stats.ox.ac.uk/pub/RWin/
SystemRequirements C++11
Packaged 2016-11-04 06:02:11 UTC; Andri
Repository CRAN
Date/Publication 2016-11-04 22:33:51
depends base , R (>= 3.1.1) , stats
linkingto BH
imports boot , foreign , graphics , grDevices , manipulate , MASS , methods , mvtnorm , Rcpp (>= 0.11.5) , utils
suggests RDCOMClient , tcltk
Contributors Yulia Gel, David Mitchell, Kamil Barton, Stephane Champely, Leanne Chhay, Markus Huerzeler, Daniel Malter, Yongyi Min, Markus Naepflin, Michael Smithson, Yves Tille, Stefan Wellek, Detlew Labes, Friederich Leisch, George Marsaglia, John Marsaglia, Nanina Anderegg, Clint Cummins, Dong Li, Hong Ooi, Pete Hurd, Matthias Kohl, Bill Venables, Rob Hyndman, David Meyer, Romain Francois, Dirk Eddelbuettel, Kevin Ushey, Brian Ripley, Ben Bolker, Jim Lemon, John Verzani, Tony Plate, Michael Friendly, Richard Heiberger, Torsten Hothorn, Achim Zeileis, Hadley Wickham, Klaus Nordhausen, Terry Therneau, Martin Maechler, Nick Parsons, Venkatraman Seshan, Tal Galili, Sandrine Pavoine, Gregory Warnes, Max Kuhn, Jeremy VanDerWal, John Fox, Michael Dewey, Greg Snow, Charles Dupont, Peter Wolf, Werner Stahel, Arni Magnusson, Tyler Rinker, Michael Hoehle, Gabor Grothendieck, Henric Nilsson, Derek Ogle, Giovanni Millo, Kamil Erguler, Andri Includes R source code, or previously published by, Tomas Aragon, Antti Arppe, Adrian Baddeley, Frederico Caeiro, Daniel Chessel, Harold Doran, Stephane Dray, Jeff Enos, Claus Ekstrom, Martin Elff, Matthias Gamer, Joseph Gastwirth, Juergen Gross, Frank Harrell Jr, Christian Hoffmann, Wallace Hui, Pablo Villacorta Iglesias, Mikko Korpela, Alina Matei, Weiwen Miao, Daniel Navarro, Roland Rapold, William Revelle, Caroline Rodriguez, Mark Stevenson, Adrian Trapletti, Rand Wilcox, Daniel Wollschlaeger, Thomas Yee, Richard Farebrother, Nathan Russell

Include our badge in your README

[![Rdoc](http://www.rdocumentation.org/badges/version/DescTools)](http://www.rdocumentation.org/packages/DescTools)