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DiscreteFDR (version 1.0)

Multiple Testing Procedures with Adaptation for Discrete Tests

Description

Multiple testing procedures described in the paper Dhler, Durand and Roquain (2018) "New FDR bounds for discrete and heterogeneous tests" . The main procedures of the paper (HSU and HSD), their adaptive counterparts (AHSU and AHSD), and the HBR variant are available and are coded to take as input a set of observed p-values and their discrete support under the null. A function to compute such p-values and supports for Fisher's exact tests is also provided.

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Version

Install

install.packages('DiscreteFDR')

Monthly Downloads

311

Version

1.0

License

MIT + file LICENSE

Maintainer

Guillermo Durand

Last Published

July 10th, 2018

Functions in DiscreteFDR (1.0)

DBR

[DBR-lambda] procedure
fisher.pvalues.support

Computing discrete p-values and their support for Fisher's exact tests
kernel.ADBH

Kernel functions for ADBH
ADBH

[AHSU] and [AHSD] procedures
DBH

[HSU] and [HSD] procedures
build.stepfuns

Building step functions from pCDFlist
amnesia

Amnesia and other drug reactions in the MHRA pharmacovigilance spontaneous reporting system
match.pvals

Matching raw p-values with supports
short.eff

Shortcuts for critical values computation
kernel.DBR

Kernel functions for DBR
kernel.DBH

Kernel functions for DBH
DiscreteFDR-package

DiscreteFDR: Multiple Testing Procedures with Adaptation for Discrete Tests