DiscreteFDR v1.1

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Multiple Testing Procedures with Adaptation for Discrete Tests

Multiple testing procedures described in the paper D<c3><b6>hler, Durand and Roquain (2018) "New FDR bounds for discrete and heterogeneous tests" <doi:10.1214/18-EJS1441>. The main procedures of the paper (HSU and HSD), their adaptive counterparts (AHSU and AHSD), and the HBR variant are available and are coded to take as input a set of observed p-values and their discrete support under the null. A function to compute such p-values and supports for Fisher's exact tests is also provided, along with a wrapper allowing to apply discrete procedures directly from contingency tables.

Functions in DiscreteFDR

Name Description
DiscreteFDR-package DiscreteFDR: Multiple Testing Procedures with Adaptation for Discrete Tests
kernel.DBR Kernel functions for DBR
match.pvals Matching raw p-values with supports
short.eff Shortcuts for critical values computation
build.stepfuns Building step functions from pCDFlist
fast.Discrete Fast application of discrete procedures
kernel.ADBH Kernel functions for ADBH
amnesia Amnesia and other drug reactions in the MHRA pharmacovigilance spontaneous reporting system
fisher.pvalues.support Computing discrete p-values and their support for Fisher's exact tests
kernel.DBH Kernel functions for DBH
DBR [DBR-lambda] procedure
ADBH [AHSU] and [AHSD] procedures
DBH [HSU] and [HSD] procedures
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Details

Type Package
Date 2018-08-21
License MIT + file LICENSE
Encoding UTF-8
LazyData true
RoxygenNote 6.0.1
NeedsCompilation no
Packaged 2018-09-05 12:37:49 UTC; gdurand
Repository CRAN
Date/Publication 2018-09-12 17:30:03 UTC

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