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DiscreteFDR (version 1.1)

Multiple Testing Procedures with Adaptation for Discrete Tests

Description

Multiple testing procedures described in the paper Dhler, Durand and Roquain (2018) "New FDR bounds for discrete and heterogeneous tests" . The main procedures of the paper (HSU and HSD), their adaptive counterparts (AHSU and AHSD), and the HBR variant are available and are coded to take as input a set of observed p-values and their discrete support under the null. A function to compute such p-values and supports for Fisher's exact tests is also provided, along with a wrapper allowing to apply discrete procedures directly from contingency tables.

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Version

Install

install.packages('DiscreteFDR')

Monthly Downloads

311

Version

1.1

License

MIT + file LICENSE

Maintainer

Guillermo Durand

Last Published

September 12th, 2018

Functions in DiscreteFDR (1.1)

DiscreteFDR-package

DiscreteFDR: Multiple Testing Procedures with Adaptation for Discrete Tests
kernel.DBR

Kernel functions for DBR
match.pvals

Matching raw p-values with supports
short.eff

Shortcuts for critical values computation
build.stepfuns

Building step functions from pCDFlist
fast.Discrete

Fast application of discrete procedures
kernel.ADBH

Kernel functions for ADBH
amnesia

Amnesia and other drug reactions in the MHRA pharmacovigilance spontaneous reporting system
fisher.pvalues.support

Computing discrete p-values and their support for Fisher's exact tests
kernel.DBH

Kernel functions for DBH
DBR

[DBR-lambda] procedure
ADBH

[AHSU] and [AHSD] procedures
DBH

[HSU] and [HSD] procedures