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DiscreteFDR (version 1.2)

Multiple Testing Procedures with Adaptation for Discrete Tests

Description

Multiple testing procedures described in the paper Dhler, Durand and Roquain (2018) "New FDR bounds for discrete and heterogeneous tests" . The main procedures of the paper (HSU and HSD), their adaptive counterparts (AHSU and AHSD), and the HBR variant are available and are coded to take as input a set of observed p-values and their discrete support under the null. A function to compute such p-values and supports for Fisher's exact tests is also provided, along with a wrapper allowing to apply discrete procedures directly from contingency tables.

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Version

Install

install.packages('DiscreteFDR')

Monthly Downloads

318

Version

1.2

License

MIT + file LICENSE

Maintainer

Guillermo Durand

Last Published

January 7th, 2019

Functions in DiscreteFDR (1.2)

match.pvals

Matching raw p-values with supports
short.eff

Shortcuts for critical values computation
fisher.pvalues.support

Computing discrete p-values and their support for Fisher's exact tests
DiscreteFDR-package

DiscreteFDR: Multiple Testing Procedures with Adaptation for Discrete Tests
kernel

Kernel functions for discrete.BH
kernel.DBR

Kernel functions for DBR
DBR

[DBR-lambda] procedure
build.stepfuns

Building step functions from pCDFlist
discrete.BH

[HSU], [HSD], [AHSU] and [AHSD] procedures
amnesia

Amnesia and other drug reactions in the MHRA pharmacovigilance spontaneous reporting system
fast.Discrete

Fast application of discrete procedures