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DivInsight (version 0.1.0)

Diversity Index Calculation & Visualisation for Taxa and Location

Description

Repurpose occurrence data for calculating diversity index values, creating visuals, and generating species composition matrices for a chosen taxon and location.

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Version

Install

install.packages('DivInsight')

Monthly Downloads

2

Version

0.1.0

License

GPL-3

Maintainer

James Churchward

Last Published

August 12th, 2023

Functions in DivInsight (0.1.0)

subset_by_coordinate_ref

Subset Occurrence Dataframe
site_regroup

Regroup Sites
generate_stats

Generate Diversity Index Statistics
map_start

Create Site Map
map_add

Add to Site Map
plot_sites_scatter_H

Plot H against Date
plot_sites_trend_H

Plot H against Date
generate_speccomm

Generate Species Composition Matrix
clusterise_sites_large_dataframe

Cluster Occurrence Data (large dataframe)
Colombia

Occurence data of the Formicidae family in Colombia from 2000 to 2023
generate_spec_tables_df

Generate Species Tables
filter_groups_by_minsize

Filter Group by Size
generate_spec_tables

Generate Species Tables
filter_groups_by_number

Filter Group by Name
gbif_to_dataframe

Convert GBIF Object
clusterise_sites

Cluster Occurrence Data
DivInsight-package

DivInsight: Diversity Index Calculation & Visualisation for Taxa and Location