DrugUtilisation (version 1.0.1)

summariseDrugRestart: Summarise the drug restart per window.

Description

Summarise the drug restart per window.

Usage

summariseDrugRestart(
  cohort,
  cohortId = NULL,
  switchCohortTable,
  switchCohortId = NULL,
  strata = list(),
  followUpDays = Inf,
  censorDate = NULL,
  incident = TRUE,
  restrictToFirstDiscontinuation = TRUE
)

Value

A summarised_result object with the percentages of restart, switch and not exposed per window.

Arguments

cohort

A cohort_table object.

cohortId

A cohort definition id to restrict by. If NULL, all cohorts will be included.

switchCohortTable

A cohort table in the cdm that contains possible alternative treatments.

switchCohortId

The cohort ids to be used from switchCohortTable. If NULL all cohort definition ids are used.

strata

A list of variables to stratify results. These variables must have been added as additional columns in the cohort table.

followUpDays

A vector of number of days to follow up. It can be multiple values.

censorDate

Name of a column that indicates the date to stop the analysis, if NULL end of individuals observation is used.

incident

Whether the switch treatment has to be incident (start after discontinuation) or not (it can start before the discontinuation and last till after).

restrictToFirstDiscontinuation

Whether to consider only the first discontinuation episode or all of them.

Examples

# \donttest{
cdm <- mockDrugUtilisation()

conceptlist <- list("a" = 1125360, "b" = c(1503297, 1503327))
cdm <- generateDrugUtilisationCohortSet(
  cdm = cdm,
  name = "switch_cohort",
  conceptSet = conceptlist
)

result <- cdm$cohort1 |>
  summariseDrugRestart(switchCohortTable = "switch_cohort")

tableDrugRestart(result)
# }