pls_pro

Fits a Cox model using Partial Least Squares reduction for high-dimensional data.

Provides a framework to build and evaluate diagnosis or
prognosis models using stacking, voting, and bagging ensemble
techniques with various base learners. The package also includes
tools for visualization and interpretation of models. The development
version of the package is available on 'GitHub' at
<https://github.com/xiaojie0519/E2E>. The methods
are based on the foundational work of Breiman (1996) <doi:10.1007/BF00058655>
on bagging and Wolpert (1992) <doi:10.1016/S0893-6080(05)80023-1>
on stacking.

Shanjie Luan

Ensemble Learning Framework for Diagnostic and Prognostic
Modeling

pls_pro function

<dl><dt>X</dt>
<dd>A data frame of predictors.</dd>
<dt>y_surv</dt>
<dd>A <code>Surv</code> object containing time and status.</dd>
<dt>tune</dt>
<dd>Logical. If TRUE, performs internal tuning (currently handled by cv.glmnet automatically).</dd></dl>

Arguments

Train Partial Least Squares Cox (PLS-Cox) — pls_pro

<dl>

<dt>X</dt>
<dd>A data frame of predictors.</dd>


<dt>y_surv</dt>
<dd>A <code>Surv</code> object containing time and status.</dd>


<dt>tune</dt>
<dd>Logical. If TRUE, performs internal tuning (currently handled by cv.glmnet automatically).</dd>

</dl>

pls_pro: Train Partial Least Squares Cox (PLS-Cox)

Description

Usage

Value

Arguments