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EBS (version 2.7)

Exact Bayesian Segmentation

Description

This package performs an exact bayesian segmentation on data and returns the probabilities of breakpoints, an ICL criteria, comparison of change-point location, etc

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Version

Install

install.packages('EBS')

Monthly Downloads

15

Version

2.7

License

GPL (>= 2)

Maintainer

Alice Cleynen

Last Published

August 28th, 2013

Functions in EBS (2.7)

Matrix of prior values for each interval

~~ Methods for Function Data ~~

~~ Methods for Function Model ~~

Contains funcions that run exact bayesian changepoint methods and return changepoint probabilities and ICL criteria for model selection

HyperParameters

Generic function

Overdispersion-methods

~~ Methods for Function Overdispersion ~~

~~ Methods for Function getCol ~~

Exact Bayesian Segmentation for Poisson, Negative Binomial and Normal models

Generic function

Model Selection by Integrated Completed Likelihood criterion

EBSProfiles-class

Class "EBSProfiles"

HyperParameters-methods

~~ Methods for Function HyperParameters ~~

Generic function

Generic function

Generic function

~~ Methods for Function Li ~~

~~ Methods for Function show in Package methods ~~

getKmax-methods

~~ Methods for Function getKmax ~~

Statistic for Profile Comparison

Generic function

Plot distribution of changepoints of one profile

getOverdispersion-methods

~~ Methods for Function getOverdispersion ~~

Generic function

Probability of kth changepoint in a segmentation in K segments

getHyperParameters-methods

~~ Methods for Function getHyperParameters ~~

Generic function

Generic function

Generic function

~~ Methods for Function getP ~~

Generic function

~~ Methods for Function Col ~~

Prior distribution of change-point when uniform prior on segmentation

getHyperParameters

Generic function

Model Selection by Integrated Completed Likelihood criterion

Segmentation information for one profile out of the set

~~ Methods for Function getLi ~~

CompCredibility

Comparison of two profiles with credibility intervals

Generic function

Generic function

Exact Bayesian Segmentation for multiple profiles

EBSPriorProfiles

Matrix of prior values for each interval

getPriorm-methods

~~ Methods for Function getPriorm ~~

NbConditions-methods

~~ Methods for Function NbConditions in Package EBS ~~

getModel-methods

~~ Methods for Function getModel ~~

getOverdispersion

Generic function

Generic function

Prior probability of E0

getLength-methods

~~ Methods for Function getLength ~~

Generic function

Generic function

Generic function

Model Selection by BIC Criterion

~~ Methods for Function Kmax ~~

Posterior probabilities of the number of segments

EBSPlotProbaProfiles

Plot distribution of changepoints of each profile

Generic function

~~ Methods for Function Length ~~

Generic function

Number of segmentations in K segments

~~ Methods for Function Priorm ~~

Variance-methods

~~ Methods for Function Variance ~~

Generic function

matProba-methods

~~ Methods for Function matProba ~~

getData-methods

~~ Methods for Function getData ~~

Generic function

Truncated Poisson distribution

getVariance-methods

~~ Methods for Function getVariance ~~