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EBS (version 2.8)

Exact Bayesian Segmentation

Description

This package performs an exact bayesian segmentation on data and returns the probabilities of breakpoints, an ICL criteria, comparison of change-point location, etc

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Version

Install

install.packages('EBS')

Monthly Downloads

15

Version

2.8

License

GPL (>= 2)

Maintainer

Alice Cleynen

Last Published

September 16th, 2013

Functions in EBS (2.8)

HyperParameters-methods

~~ Methods for Function HyperParameters ~~

Generic function

Model Selection by Integrated Completed Likelihood criterion

EBSPriorProfiles

Matrix of prior values for each interval

getLength-methods

~~ Methods for Function getLength ~~

Exact Bayesian Segmentation for multiple profiles

Generic function

~~ Methods for Function getCol ~~

Generic function

Generic function

getPriorm-methods

~~ Methods for Function getPriorm ~~

Generic function

getVariance-methods

~~ Methods for Function getVariance ~~

~~ Methods for Function Priorm ~~

~~ Methods for Function Model ~~

Plot distribution of changepoints of one profile

~~ Methods for Function Kmax ~~

HyperParameters

Generic function

Generic function

Generic function

Statistic for Profile Comparison

Prior probability of E0

EBSProfiles-class

Class "EBSProfiles"

Generic function

Generic function

NbConditions-methods

~~ Methods for Function NbConditions in Package EBS ~~

getOverdispersion

Generic function

~~ Methods for Function getP ~~

Variance-methods

~~ Methods for Function Variance ~~

Generic function

~~ Methods for Function Length ~~

Model Selection by BIC Criterion

Probability of kth changepoint in a segmentation in K segments

~~ Methods for Function Li ~~

Generic function

getHyperParameters-methods

~~ Methods for Function getHyperParameters ~~

getModel-methods

~~ Methods for Function getModel ~~

~~ Methods for Function show in Package methods ~~

Generic function

Posterior probabilities of the number of segments

~~ Methods for Function Col ~~

Contains funcions that run exact bayesian changepoint methods and return changepoint probabilities and ICL criteria for model selection

getOverdispersion-methods

~~ Methods for Function getOverdispersion ~~

getData-methods

~~ Methods for Function getData ~~

Generic function

Generic function

getKmax-methods

~~ Methods for Function getKmax ~~

Exact Bayesian Segmentation for Poisson, Negative Binomial and Normal models

Generic function

Number of segmentations in K segments

Generic function

Generic function

Segmentation information for one profile out of the set

getHyperParameters

Generic function

Matrix of prior values for each interval

Generic function

EBSPlotProbaProfiles

Plot distribution of changepoints of each profile

~~ Methods for Function Data ~~

Generic function

Prior distribution of change-point when uniform prior on segmentation

matProba-methods

~~ Methods for Function matProba ~~

Truncated Poisson distribution

CompCredibility

Comparison of two profiles with credibility intervals

Generic function

~~ Methods for Function getLi ~~

Overdispersion-methods

~~ Methods for Function Overdispersion ~~

Model Selection by Integrated Completed Likelihood criterion