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EBS (version 3.0)

Exact Bayesian Segmentation

Description

This package performs an exact Bayesian segmentation on data and returns the probabilities of breakpoints, an ICL criteria, comparison of change-point location, etc

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Version

Install

install.packages('EBS')

Monthly Downloads

15

Version

3.0

License

GPL (>= 2)

Maintainer

Alice Cleynen

Last Published

March 17th, 2014

Functions in EBS (3.0)

Exact Bayesian Segmentation for multiple profiles

Segmentation information for one profile out of the set

Generic function

Generic function

~~ Methods for Function Li ~~

~~ Methods for Function Priorm ~~

Generic function

Model Selection by Integrated Completed Likelihood criterion

Exact Bayesian Segmentation for Poisson, Negative Binomial and Normal models

Generic function

~~ Methods for Function Kmax ~~

~~ Methods for Function Data ~~

HyperParameters

Generic function

Posterior probabilities of the number of segments

Prior distribution of change-point when uniform prior on segmentation

Contains funcions that run exact bayesian changepoint methods and return changepoint probabilities and ICL criteria for model selection

Number of segmentations in K segments

Plot distribution of changepoints of one profile

Generic function

getModel-methods

~~ Methods for Function getModel ~~

getKmax-methods

~~ Methods for Function getKmax ~~

Generic function

Generic function

Matrix of prior values for each interval

EBSPriorProfiles

Matrix of prior values for each interval

getOverdispersion-methods

~~ Methods for Function getOverdispersion ~~

getHyperParameters-methods

~~ Methods for Function getHyperParameters ~~

~~ Methods for Function show in Package methods ~~

~~ Methods for Function Col ~~

getData-methods

~~ Methods for Function getData ~~

getHyperParameters

Generic function

NbConditions-methods

~~ Methods for Function NbConditions in Package EBS ~~

Generic function

getVariance-methods

~~ Methods for Function getVariance ~~

getLength-methods

~~ Methods for Function getLength ~~

Generic function

Model Selection by Integrated Completed Likelihood criterion

EBSPlotProbaProfiles

Plot distribution of changepoints of each profile

CompCredibility

Comparison of two profiles with credibility intervals

matProba-methods

~~ Methods for Function matProba ~~

getOverdispersion

Generic function

Generic function

Probability of kth changepoint in a segmentation in K segments

Overdispersion-methods

~~ Methods for Function Overdispersion ~~

Model Selection by BIC Criterion

~~ Methods for Function Model ~~

Variance-methods

~~ Methods for Function Variance ~~

Generic function

Generic function

Generic function

Prior probability of E0

Generic function

Truncated Poisson distribution

Generic function

~~ Methods for Function getCol ~~

Generic function

getPriorm-methods

~~ Methods for Function getPriorm ~~

EBSProfiles-class

Class "EBSProfiles"

Generic function

Generic function

Statistic for Profile Comparison

Generic function

~~ Methods for Function Length ~~

~~ Methods for Function getLi ~~

Generic function

~~ Methods for Function getP ~~

HyperParameters-methods

~~ Methods for Function HyperParameters ~~