EBSEA (version 1.0.0)

visualizeGenes: Visualize Gene

Description

Plots for each exon of the gene entered by the user, the mean of the counts and the fold changes.

Usage

visualizeGenes(gene, group, countData, result)

Arguments

gene

Gene Name. The gene name should be the from the genes in count data.

group

A vector indicating the sample group in the experiment.

countData

A dataframe of the original exon count data.

result

Results returned by EBSEA.

Value

A plot of mean counts and fold changes of exons of a gene.

See Also

EBSEA

Examples

data(origCounts)
group <- c('Group1', 'Group1', 'Group1', 'Group2', 'Group2', 'Group2', 'Group2')
result <- EBSEA(origCounts, group)
visualizeGenes('FBgn0000017', group, origCounts, result)