EBSeq (version 1.12.0)

PlotExp: Plot expression of a single gene

Description

Plot expression of a single gene

Usage

PlotExp(NormalizedData, Conditions, Name)

Arguments

NormalizedData

Expression data after adjusting for library size factors

Conditions

sample conditions

Name

name of the gene/isoform of interest

Value

• PlotExp() funtion will generate line plots for genes or isoforms of interest.

Details

PlotExp() function will generate line plots for genes or isoforms of interest.

Examples

data(GeneExampleData)
CondVector <- rep(paste("t",1:5,sep=""),each=3)
Conditions <- factor(CondVector, levels=c("t1","t2","t3","t4","t5"))
Sizes <- MedianNorm(GeneExampleData)
NormData <- GetNormalizedMat(GeneExampleData, Sizes)
PlotExp(NormData, Conditions, "Gene_1")