EGAD (version 1.0.3)

build_binary_network: Builds a binary network

Description

The function creates a gene-by-gene matrix with binary entries indicating interaction (1) or no interaction (0) between the genes.

Usage

build_binary_network(data, list)

Arguments

data

2-column matrix, each row a pair indicating a relationship or interaction

list

string array of genes/labels/ids

Value

net matrix binary characterizing interactions

Examples

data <- cbind(edgeA=c('gene1','gene2'),edgeB=c('gene3','gene3'))
list <- c('gene1','gene2','gene3')
network <- build_binary_network(data,list)