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EGAnet (version 2.3.0)

Exploratory Graph Analysis – a Framework for Estimating the Number of Dimensions in Multivariate Data using Network Psychometrics

Description

Implements the Exploratory Graph Analysis (EGA) framework for dimensionality and psychometric assessment. EGA estimates the number of dimensions in psychological data using network estimation methods and community detection algorithms. A bootstrap method is provided to assess the stability of dimensions and items. Fit is evaluated using the Entropy Fit family of indices. Unique Variable Analysis evaluates the extent to which items are locally dependent (or redundant). Network loadings provide similar information to factor loadings and can be used to compute network scores. A bootstrap and permutation approach are available to assess configural and metric invariance. Hierarchical structures can be detected using Hierarchical EGA. Time series and intensive longitudinal data can be analyzed using Dynamic EGA, supporting individual, group, and population level assessments.

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Version

Install

install.packages('EGAnet')

Monthly Downloads

4,832

Version

2.3.0

License

AGPL (>= 3.0)

Maintainer

Hudson Golino

Last Published

April 9th, 2025

Functions in EGAnet (2.3.0)

color_palette_EGA

EGA Color Palettes
auto.correlate

Automatic correlations
TMFG

Triangulated Maximally Filtered Graph
community.consensus

Applies the Consensus Clustering Method (Louvain only)
LCT

Loadings Comparison Test
community.compare

Compares Community Detection Solutions Using Permutation
UVA

Unique Variable Analysis
boot.ergoInfo

Bootstrap Test for the Ergodicity Information Index
bootEGA

Bootstrap Exploratory Graph Analysis
boot.wmt

bootEGA Results of wmt2Data
dimensionStability

Dimension Stability Statistics from bootEGA
community.unidimensional

Approaches to Detect Unidimensional Communities
community.detection

Apply a Community Detection Algorithm
convert2igraph

Convert networks to igraph
cosine

Cosine similarity
compare.EGA.plots

Visually Compare Two or More EGAnet plots
depression

Depression Data
dnn.weights

Loadings Comparison Test Deep Learning Neural Network Weights
hierEGA

Hierarchical EGA
convert2tidygraph

Convert networks to tidygraph
dynEGA

Dynamic Exploratory Graph Analysis
ergoInfo

Ergodicity Information Index
dynEGA.ind.pop

Intra- and Inter-individual dynEGA
genTEFI

Generalized Total Entropy Fit Index using Von Neumman's entropy (Quantum Information Theory) for correlation matrices
community.homogenize

Homogenize Community Memberships
modularity

Computes the (Signed) Modularity Statistic
jsd

Jensen-Shannon Distance
glla

Generalized Local Linear Approximation
igraph2matrix

Convert network to matrix
net.loads

Network Loadings
net.scores

Network Scores
ega.wmt

EGA Network of wmt2Data
entropyFit

Entropy Fit Index
network.predictability

Predict New Data based on Network
network.nonconvex

GLASSO with Non-convex Penalties
wto

Weighted Topological Overlap
optimism

Optimism Data
itemDiagnostics

Diagnostics Analysis for Low Stability Items
itemStability

Item Stability Statistics from bootEGA
polychoric.matrix

Computes Polychoric Correlations
network.estimation

Apply a Network Estimation Method
network.compare

Compares Network Structures Using Permutation
invariance

Measurement Invariance of EGA Structure
totalCor

Total Correlation
tefi.compare

Compare Total Entropy Fit Index (tefi) Between Two Structures
intelligenceBattery

Intelligence Data
wmt2

WMT-2 Data
simDFM

Simulate data following a Dynamic Factor Model
sim.dynEGA

sim.dynEGA Data
simEGM

Simulate data following a Exploratory Graph Model (EGM)
tefi

Total Entropy Fit Index using Von Neumman's entropy (Quantum Information Theory) for correlation matrices
frobenius

Frobenius Norm (Similarity)
riEGA

Random-Intercept EGA
totalCorMat

Total Correlation Matrix
infoCluster

Information Theoretic Mixture Clustering for dynEGA
information

Information Theory Metrics
prime.num

Prime Numbers through 100,000
vn.entropy

Entropy Fit Index using Von Neumman's entropy (Quantum Information Theory) for correlation matrices
EGA

Exploratory Graph Analysis
CFA

CFA Fit of EGA or hierEGA Structure
EGA.fit

EGA Optimal Model Fit using the Total Entropy Fit Index (tefi)
Embed

Time-delay Embedding
EGAnet-plot

S3 Plot Methods for EGAnet
EBICglasso.qgraph

EBICglasso from qgraph 1.4.4
EGM

Exploratory Graph Model
EGAnet-package

EGAnet-package
EGM.compare

Compare EGM with EFA
EGA.estimate

Estimates EGA for Multidimensional Structures