readTransform

Convenience function for reading in a CSV file, and making small
modifications to a data.frame.

Process and analyze electronic health record (EHR) data. The 'EHR'
package provides modules to perform diverse medication-related studies using
data from EHR databases. Especially, the package includes modules to perform
pharmacokinetic/pharmacodynamic (PK/PD) analyses using EHRs, as outlined in
Choi, Beck, McNeer, Weeks, Williams, James, Niu, Abou-Khalil, Birdwell, Roden,
Stein, Bejan, Denny, and Van Driest (2020) <doi:10.1002/cpt.1787>. Additional
modules will be added in future. In addition, this package provides various
functions useful to perform Phenome Wide Association Study (PheWAS) to explore
associations between drug exposure and phenotypes obtained from EHR data, as
outlined in Choi, Carroll, Beck, Mosley, Roden, Denny, and Van Driest (2018)
<doi:10.1093/bioinformatics/bty306>.

Leena Choi

Electronic Health Record (EHR) Data Processing and Analysis Tool

Cole Beck

Hannah Weeks

Elizabeth McNeer

Nathan James

Michael Williams

readTransform function

<dl><dt>file</dt>
<dd>filename of a CSV file</dd>
<dt>...</dt>
<dd>additional information passed to <code>dataTransformation</code></dd></dl>

Arguments

Read and Transform — readTransform

<dl>

<dt>file</dt>
<dd>filename of a CSV file</dd>


<dt>...</dt>
<dd>additional information passed to <code>dataTransformation</code></dd>

</dl>

readTransform: Read and Transform

Description

Usage

Value

Arguments

Details