ELISAtools (v 0.1.8)

R software tool package to do ELISA analysis, especially with batch effect correction/normalization

Installation

To install the release version of package (v0.1.8)

install.packages("ELISAtools")

Or to install the latest code from github

devtools::install_github("BULQI/ELISAtools")

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Version

Install

install.packages('ELISAtools')

Monthly Downloads

413

Version

0.1.8

License

MIT + file LICENSE

Maintainer

Feng Feng

Last Published

April 6th, 2025

Functions in ELISAtools (0.1.8)

plotBatchData

Plot ELISA data for one batch

predictAll

Predict the concentration of samples based on fitting

saveDataText

Save elisa_batch analysis results

rangeOD

Get the OD ranges (min/max)

runFit

Fit 5- or 4-parameter logistic function

loadData

Read data according to the design file

read.plate

Read the single ELISA OD plate

read.annotations

Read the annotations of plates

plotAlignData

Plot all batch data together

saveDB

Save the elisa_batch data

prepareRegInput

Prepare the input for regressoin

read.annotation

Read the annotation of single ELISA plate

reportHtml

Report ELISA data in HTML format.

read.plates

Read the ELISA OD files

inv.f5pl

The inverse of the 5-parameter logistic function

elisa_plate

Constructor function to build an elisa_plate object

combineData

Combine elisa_batch data

elisa_batch-class

S4 class definition of an elisa_batch object

annotate.plate

S3 method to annotate ELISA plate

elisa_run-class

S4 class definition of an elisa_run object

ELISAtools-package

ELISA data analysis with batch correction

elisa_run

Constructor function to build an elisa_run object

elisa_batch

Constructor function to build an elisa_batch object

elisa_plate-class

S4 class definition of an elisa_plate object

avoidZero

Get rid of zeros in a numeric vector

loadDB

Read the saved elisa_batch data

prepareInitsLM

Prepare initial values for fitting shifts

f5pl

The five-parameter logistic function

load.ODs

Function to load OD data