getClinic

A character specifies the disease to download from TCGA such as BLCA

disease

A path shows where the data will be stored.

basedir


getClinic is a function to download latest version of clinic data for 
all samples of certain cancer types from TCGA website.



ELMER is designed to use DNA methylation and gene expression from a large number of samples to infere regulatory element landscape and transcription factor network in primary tissue.

Lijing Yao

ELMER


Inferring Regulatory Element Landscapes and Transcription Factor
Networks Using Cancer Methylomes

getClinic function

getClinic is a function to download latest version of clinic data for 
all samples of certain cancer types from TCGA website.

getClinic: getClinic to download clinic data for certain cancer types from TCGA website.

Description

Usage

Arguments

Value

References