getRNAseq

A character specifies disease in TCGA such as BLCA

disease

A path shows where the data will be stored.

basedir


getRNAseq is a function to download RNAseq data for all samples of a certain cancer
type from TCGA



ELMER is designed to use DNA methylation and gene expression from a large number of samples to infere regulatory element landscape and transcription factor network in primary tissue.

Lijing Yao

ELMER


Inferring Regulatory Element Landscapes and Transcription Factor
Networks Using Cancer Methylomes

getRNAseq function

getRNAseq is a function to download RNAseq data for all samples of a certain cancer
type from TCGA

getRNAseq: getRNAseq to download all RNAseq data for a certain cancer type from TCGA.

Description

Usage

Arguments

Value

References