EMAS (version 0.2.2)

EMAS.volcano: Plotting the volcano plot from the EMAS results

Description

Function to plot a volcano plot from the Emas results.

Usage

EMAS.volcano(
  E.result,
  epiwideline = -log10(1e-07),
  suggestiveline = -log10(1e-05)
)

Value

No return value, called for side effects.

Arguments

E.result

A data.frame produced by Emas.

epiwideline

Where to draw a "epigenome-wide sigificant" line. Default -log10(1.0e-7).

suggestiveline

Where to draw a "suggestive" line. Default -log10(1.0e-5). Set to FALSE to disable.

Author

Xiuquan Nie, [e-mail]

Details

This function can plot a volcano plot from the Emas results.

Examples

data(E.result)
EMAS.volcano(E.result, 
             epiwideline = -log10(0.05/2000),
             suggestiveline = -log10(1/100))