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EMMIXSSL (version 1.1.1)

Semi-Supervised Gaussian Mixture Model with a Missing-Data Mechanism

Description

The algorithm of semi-supervised learning based on finite Gaussian mixture models with a missing-data mechanism is designed for a fitting g-class Gaussian mixture model via maximum likelihood (ML). It is proposed to treat the labels of the unclassified features as missing-data and to introduce a framework for their missing as in the pioneering work of Rubin (1976) for missing in incomplete data analysis. This dependency in the missingness pattern can be leveraged to provide additional information about the optimal classifier as specified by Bayes’ rule.

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Version

Install

install.packages('EMMIXSSL')

Monthly Downloads

190

Version

1.1.1

License

GPL-3

Maintainer

Ziyang Lyu

Last Published

October 18th, 2022

Functions in EMMIXSSL (1.1.1)

loglk_miss

Log likelihood function formed on the basis of the missing-label indicator
loglk_full

Full log-likelihood function
neg_objective_function

Negative objective function for EMMIXSSL
normalise_logprob

Normalize log-probability
initialvalue

Initial values for ECM
loglk_ig

Log likelihood for partially classified data with ingoring the missing mechanism
par2list

Transfer a vector into a list
makelabelmatrix

Label matrix
list2par

Transfer a list into a vector
logsumexp

log summation of exponential function
rmix

Normal mixture model generator.
rlabel

Generation of a missing-data indicator
pro2vec

Transfer a probability vector into a vector
vec2pro

Transfer an informative vector to a probability vector
vec2cov

Transform a vector into a matrix
discriminant_beta

Discriminant function
cov2vec

Transform a variance matrix into a vector
errorrate

Error rate of the Bayes rule for two-class Gaussian homoscedastic model
gastro_label_binary

Gastrointestinal binary labels
gastro_label_trinary

Gastrointestinal trinary labels
get_clusterprobs

Posterior probability
gastrodata

Gastrointestinal dataset
Classifier_Bayes

Classifier based on Bayes rule
get_entropy

Shannon entropy
EMMIXSSL

Fitting Gaussian mixture models