ENCODExplorer (version 1.4.3)

export_ENCODEdb_matrix: Extract essential informations from the RSQLite databse in a list of data.frames

Description

Extract essential informations from the RSQLite databse in a list of data.frames

Usage

export_ENCODEdb_matrix(database_filename, mc.cores = 1)

Arguments

database_filename

The name of the file to save the database into.

mc.cores

The number of cores to use. Default 1

Value

a list containing two elements. The first one 'experiment' is a data.frame containing essential informations for each file part of an experiment ; the second one 'dataset' is a data.frame containing essential informations for each file part of a dataset.

Examples

    database_filename <- system.file("extdata/ENCODEdb.sqlite",
                                                                       package = "ENCODEdb")
    ## Not run: 
#         export_ENCODEdb_matrix(database_filename = database_filename)
#     ## End(Not run)