getReactomeMatchInfo: Retrieve Reactome pathway match info from the 'Entry' node of the Enfin xml document.
Description
Retrieve Reactome pathway match info from the 'Entry' node of the Enfin xml document.
Usage
getReactomeMatchInfo(entry, positiveResultIDs)
Arguments
entry
The 'Entry' node of the Enfin xml document.
positiveResultIDs
Set of 'ID' nodes of the Enfin xml document which contain the pair match information.
Value
the pathway description and the third containing the link to Reactome web page for a given pathway.
If 'enfin-reactome-add-coverage' option is set to 'true' then two extra columns
are added: the first for pathway coverage number, and the second for the total protein count per pathway.
