simTransComms

A dataset containing three simulated five species communities stressed through a critical transition.

datasets

Rolling and expanding window approaches to assessing abundance based early warning signals, non-equilibrium resilience measures, and machine learning. See Dakos et al. (2012) <doi:10.1371/journal.pone.0041010>, Deb et al. (2022) <doi:10.1098/rsos.211475>, Drake and Griffen (2010) <doi:10.1038/nature09389>, Ushio et al. (2018) <doi:10.1038/nature25504> and Weinans et al. (2021) <doi:10.1038/s41598-021-87839-y> for methodological details. Graphical presentation of the outputs are also provided for clear and publishable figures. Visit the 'EWSmethods' website for more information, and tutorials.

Duncan O'Brien

EWSmethods

Forecasting Tipping Points at the Community Level

Smita Deb

Sahil Sidheekh

Narayanan Krishnan

Partha Dutta

Christopher Clements

simTransComms function

A list of three dataframes with 301 rows and 7 variables each:<dl>
 <dt>community_id</dt>
<dd>the identity of the simulated community</dd> <dt>time</dt>
<dd>time index</dd> <dt>spp_1</dt>
<dd>density of species 1</dd> <dt>spp_2</dt>
<dd>density of species 1</dd> <dt>spp_3</dt>
<dd>density of species 1</dd> <dt>spp_4</dt>
<dd>density of species 1</dd> <dt>spp_5</dt>
<dd>density of species 1</dd> <dt>inflection_pt</dt>
<dd>the time index where transition occurs</dd>
</dl>

Format

Three Simulated Transitioning Communities. — simTransComms

A list of three dataframes with 301 rows and 7 variables each:<dl>
 <dt>community_id</dt>
<dd>the identity of the simulated community</dd>

 <dt>time</dt>
<dd>time index</dd>

 <dt>spp_1</dt>
<dd>density of species 1</dd>

 <dt>spp_2</dt>
<dd>density of species 1</dd>

 <dt>spp_3</dt>
<dd>density of species 1</dd>

 <dt>spp_4</dt>
<dd>density of species 1</dd>

 <dt>spp_5</dt>
<dd>density of species 1</dd>

 <dt>inflection_pt</dt>
<dd>the time index where transition occurs</dd>


</dl>

simTransComms: Three Simulated Transitioning Communities.

Description

Usage

Arguments

Format

Examples