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EZbakR (version 0.1.0)

EZQC.EZbakRData: Run quality control checks

Description

Run quality control checks

Usage

# S3 method for EZbakRData
EZQC(
  obj,
  mutrate_populations = "all",
  features = "all",
  filter_cols = "all",
  filter_condition = `&`,
  remove_features = c("NA", "__no_feature"),
  ...
)

Value

A list of ggplot2 objects visualizing the various aspects of your data assessed by EZQC().

Arguments

obj

An EZbakRData object

mutrate_populations

Same as in EstimateFractions(). See ?EstimateFractions() for details.

features

Same as in EstimateFractions(). See ?EstimateFractions() for details.

filter_cols

Same as in EstimateFractions(). See ?EstimateFractions() for details.

filter_condition

Same as in EstimateFractions(). See ?EstimateFractions() for details.

remove_features

Same as in EstimateFractions(). See ?EstimateFractions() for details.

...

Additional arguments. Currently goes unused.