EcoCleanR (version 1.0.3)

ec_extract_env_layers: Extract the Environmental data

Description

Extract the Environmental data

Usage

ec_extract_env_layers(
  data,
  env_layers = env_layers,
  latitude = "decimalLatitude",
  longitude = "decimalLongitude"
)

Value

A data table which has unique coordinates and env predictors

Arguments

data

data table which has coordinate information

env_layers

make a list of enviornmental layers which need to be extracted, example :BO_sstmean, BO_sstmax, BO_sstmin, BO_chomean, BO_phosphate or marspec layer, must check list_layer to know exact name of the layer code.

latitude

default assigned as "decimalLatitude"

longitude

default assigned as "decimalLongitude"

Examples

if (FALSE) {
env_layers <- c("BO_sstmean", "BO_chlomean", "BO_dissox", "BO_salinity")
data <- data.frame(
  scientificName = "Mexacanthina lugubris",
  decimalLongitude = c(-117, -117.8, -116.9),
  decimalLatitude = c(32.9, 33.5, 31.9)
)

data_x <- ec_extract_env_layers(data,
  env_layers = env_layers,
  latitude = "decimalLatitude",
  longitude = "decimalLongitude"
)
}