Initialize_PCA

<p>matrix in which each row represents a point</p>

data

xdim, ydim, zdim

<p>Create a grid from first 2 PCA components</p>

Provides a smooth mapping of multidimensional points into
low-dimensional space defined by a self-organizing map. Designed to work
with 'FlowSOM' and flow-cytometry use-cases. See Kratochvil et al. (2019)
<doi:10.1101/496869>.

Mirek Kratochvil

EmbedSOM

Fast Embedding Guided by Self-Organizing Map

Sofie Van Gassen

Britt Callebaut

Yvan Saeys

Ron Wehrens

Initialize_PCA function

Create a grid from first 2 PCA components — Initialize_PCA

Create a grid from first 2 PCA components

Initialize_PCA: Create a grid from first 2 PCA components

Description

Usage

Arguments

Value