epiBR0

contact

alpha


Spatial parameter(s) (&gt;0) or network parameter (s) (&gt;0) if contact is used


beta


Sparks parameter (&gt;=0), representing infections unexplained by other parts
of the model or infections coming in from outside the observed population, default value is zero


spark


Length of infectious period for each individual


infperiod


An object of class formula. See <a rd-options="" href="/link/formula?package=EpiILM&version=1.2" data-mini-rdoc="EpiILM::formula">formula</a><p></p><p>Individual-level covariate information passable through this argument. An expression of the form <code> ~ model</code> is interpreted as a specification that the susceptibility function, \(\Omega_s(i) \)  is modelled by a linear predictor specified symbolically by the model term. Such a model consists of a series of terms separated by <code>+</code> and <code>-</code> operators. If there is no covariate information, <code>Sformula</code> is null.
</p>

Sformula

tmax


Number of epidemic simulations to calculate basic reproduction number 


niter

Calculates the basic reproduction number for the specified SIR model and data set

Provides tools for simulating from discrete-time individual level models for infectious disease data analysis. This epidemic model class contains spatial and contact-network based models with two disease types: Susceptible-Infectious (SI) and Susceptible-Infectious-Removed (SIR).

Vineetha K. V

EpiILM

Spatial and Network Based Individual Level Models for Epidemics

epiBR0 function


An object of class formula. See <a rd-options='' href='formula'>formula</a>

Individual-level covariate information passable through this argument. An expression of the form <code> ~ model</code> is interpreted as a specification that the susceptibility function, \(\Omega_s(i) \)  is modelled by a linear predictor specified symbolically by the model term. Such a model consists of a series of terms separated by <code>+</code> and <code>-</code> operators. If there is no covariate information, <code>Sformula</code> is null.


epiBR0:

Description

Usage

Arguments

Value