epicurve


 Type of compartment framework, with the choice of &quot;SI&quot; for
Susceptible-Infectious diseases and &quot;SIR&quot; for
Susceptible-Infectious-Removed 


type


Plot type to be plotted, with the following choices:
&quot;complete&quot; for plotting the number of susceptible, infected and removed individuals at each time point, &quot;susceptible&quot; for  plotting  the number of susceptible individuals at each time point,
&quot;newinfect&quot; for plotting  the number of newly infected individuals at each time point, and
&quot;totalinfect&quot; for  plotting  the cumulative number of infected individuals at each time point<p></p><p></p>

plottype


Times at which individuals become infected/infectious 


inftime


Time points where the individual is removed


removaltime


Initial time point at which infection occurs, default value is one

tmin


 Specify time points at which the curve is plotted

timepoints

Produces graphs of various epidemic
curves

Provides tools for simulating from discrete-time individual level models for infectious disease data analysis. This epidemic model class contains spatial and contact-network based models with two disease types: Susceptible-Infectious (SI) and Susceptible-Infectious-Removed (SIR).

Vineetha K. V

EpiILM

Spatial and Network Based Individual Level Models for Epidemics

epicurve function


Plot type to be plotted, with the following choices:
&quot;complete&quot; for plotting the number of susceptible, infected and removed individuals at each time point, &quot;susceptible&quot; for  plotting  the number of susceptible individuals at each time point,
&quot;newinfect&quot; for plotting  the number of newly infected individuals at each time point, and
&quot;totalinfect&quot; for  plotting  the cumulative number of infected individuals at each time point



epicurve:

Description

Usage

Arguments