EpiInvert_plot

EpiInvert_plot() plots the results obtained by EpiInvert

Using variational techniques we address some epidemiological
problems as the incidence curve decomposition by inverting the renewal
equation as described in Alvarez et al. (2021) <doi:10.1073/pnas.2105112118>
and Alvarez et al. (2022) <doi:10.3390/biology11040540> or the estimation of
the functional relationship between epidemiological indicators. We also
propose a learning method for the short time forecast of the trend
incidence curve as described in
Morel et al. (2022) <doi:10.1101/2022.11.05.22281904>.

Luis Alvarez

EpiInvert

Variational Techniques in Epidemiology

Jean-David Morel

Jean-Michel Morel

EpiInvert_plot function

<dl><dt>x</dt>
<dd>an object of class <code>estimate_EpiInvert</code>.</dd>
<dt>what</dt>
<dd>one of the following drawing options:
<ul>
<li>all: a plot combining the main EpiInvert results.</li>
<li>R: a plot of the reproduction number Rt estimation.</li>
<li>incid: a plot combining the obtained incidence curves.</li>
<li>SI: the serial interval used in the EpiInvert estimation.</li>
</ul></dd>
<dt>date_start</dt>
<dd>the start date to plot</dd>
<dt>date_end</dt>
<dd>the final date to plot</dd></dl>

Arguments

EpiInvert_plot — EpiInvert_plot

<dl>

<dt>x</dt>
<dd>an object of class <code>estimate_EpiInvert</code>.</dd>


<dt>what</dt>
<dd>one of the following drawing options:
<ul>
<li>all: a plot combining the main EpiInvert results.</li>
<li>R: a plot of the reproduction number Rt estimation.</li>
<li>incid: a plot combining the obtained incidence curves.</li>
<li>SI: the serial interval used in the EpiInvert estimation.</li>
</ul></dd>


<dt>date_start</dt>
<dd>the start date to plot</dd>


<dt>date_end</dt>
<dd>the final date to plot</dd>

</dl>

EpiInvert_plot: `EpiInvert_plot`

Description

Usage

Value

Arguments

See Also