set_transmat

Master list object containing a <code>networkDynamic</code> object or
edgelist (if tergmLite is used) and other initialization information
passed from <code><a rd-options="" href="/link/netsim?package=EpiModel&version=2.0.1" data-mini-rdoc="EpiModel::netsim">netsim</a></code>.

Discordant edgelist created within <code>infection.net</code> and
<code>infection.2g.net</code>.

This function appends the transmission matrix created during
 <code>infection.net</code> and <code>infection.2g.net</code>.

Tools for simulating mathematical models of infectious disease dynamics.
Epidemic model classes include deterministic compartmental models, stochastic
individual-contact models, and stochastic network models. Network models use the
robust statistical methods of exponential-family random graph models (ERGMs)
from the Statnet suite of software packages in R. Standard templates for epidemic
modeling include SI, SIR, and SIS disease types. EpiModel features
an API for extending these templates to address novel scientific research aims.

Samuel Jenness

EpiModel

Mathematical Modeling of Infectious Disease Dynamics

Steven M. Goodreau

Martina Morris

Emily Beylerian

Skye Bender-deMoll

Kevin Weiss

Shawnee Anderson

set_transmat function

Master list object containing a <code>networkDynamic</code> object or
edgelist (if tergmLite is used) and other initialization information
passed from <code><a rd-options='' href='netsim'>netsim</a></code>.

set_transmat: Save Transmission Matrix

Description

Usage

Arguments

Details