saveout.icm

This function transfers the data from the master <code>all</code>
 object to the output <code>out</code> object at the end of each
 simulation in <code>icm</code>.

internal

Tools for simulating mathematical models of infectious disease dynamics.
Epidemic model classes include deterministic compartmental models, stochastic
individual-contact models, and stochastic network models. Network models use the
robust statistical methods of exponential-family random graph models (ERGMs)
from the Statnet suite of software packages in R. Standard templates for epidemic
modeling include SI, SIR, and SIS disease types. EpiModel features an API for
extending these templates to address novel scientific research aims. Full
methods for EpiModel are detailed in Jenness et al. (2018, <doi:10.18637/jss.v084.i08>).

Samuel Jenness

EpiModel

Mathematical Modeling of Infectious Disease Dynamics

Steven M. Goodreau

Martina Morris

Adrien Le Guillou

Skye Bender-deMoll

Chad Klumb

saveout.icm function

<dl><dt>dat</dt>
<dd>Master object in <code>icm</code> simulations.</dd>
<dt>s</dt>
<dd>Current run number.</dd>
<dt>out</dt>
<dd>Out list passed back in for updating at runs 2+.</dd></dl>

Arguments

Save icm Data to Output List Format — saveout.icm

<dl>

<dt>dat</dt>
<dd>Master object in <code>icm</code> simulations.</dd>


<dt>s</dt>
<dd>Current run number.</dd>


<dt>out</dt>
<dd>Out list passed back in for updating at runs 2+.</dd>

</dl>

saveout.icm: Save icm Data to Output List Format

Description

Usage

Arguments