report_summary

A data.table of summarised estimates containing the following variables:
variable, median, bottom, and top. It should contain the following estimates: R, infections, and r
(rate of growth).

summarised_estimates

A data.table containing Rt samples with the following variables: sample and value.

rt_samples

Provide Summary Statistics for Estimated Infections and Rt

Estimates the time-varying reproduction number, rate of spread,
and doubling time using a range of open-source tools (Abbott et al. (2020) <doi:10.12688/wellcomeopenres.16006.1>),
and current best practices (Gostic et al. (2020) <doi:10.1101/2020.06.18.20134858>).
It aims to help users avoid some of the limitations of naive implementations in a framework
that is informed by community feedback and is under active development.

Sam Abbott 

EpiNow2

Estimate Real-Time Case Counts and Time-Varying Epidemiological
Parameters

Joel Hellewell

Robin Thompson

Katelyn Gostic

Katharine Sherratt

Sophie Meakin

James Munday

Nikos Bosse

Joe Hickson

Paul Mee

Peter Ellis

EpiForecasts 

Sebastian Funk

report_summary function

Provide Summary Statistics for Estimated Infections and Rt — report_summary

Provide Summary Statistics for Estimated Infections and Rt

report_summary: Provide Summary Statistics for Estimated Infections and Rt

Description

Usage

Arguments

Value