plot_CrIs

plot

Numeric list of credible intervals present in the data. As produced
by <code>extract_CrIs</code>

CrIs

Numeric, overall alpha of the target line range

alpha

Numeric, size of the default line range.

size

Adds lineranges for user specified credible intervals

Estimates the time-varying reproduction number, rate of spread,
and doubling time using a range of open-source tools (Abbott et al. (2020) <doi:10.12688/wellcomeopenres.16006.1>),
and current best practices (Gostic et al. (2020) <doi:10.1101/2020.06.18.20134858>).
It aims to help users avoid some of the limitations of naive implementations in a framework
that is informed by community feedback and is under active development.

Sam Abbott 

EpiNow2

Estimate Real-Time Case Counts and Time-Varying Epidemiological
Parameters

Sam Abbott

Joel Hellewell

Katharine Sherratt

Katelyn Gostic

Joe Hickson

Hamada S. Badr

Michael DeWitt

Robin Thompson

Sophie Meakin

James Munday

Nikos Bosse

Paul Mee

Peter Ellis

EpiForecasts 

Sebastian Funk

plot_CrIs function

Plot EpiNow2 Credible Intervals — plot_CrIs

Plot EpiNow2 Credible Intervals

plot_CrIs: Plot EpiNow2 Credible Intervals

Description

Usage

Arguments

Value