save_input

A data frame of confirmed cases (confirm) by date (date). confirm must be integer and date must be
in date format.

reported_cases

Character string specifying where to save results (will create if not present).

target_folder

Saves observed data to a target location if given.

Estimates the time-varying reproduction number, rate of spread,
and doubling time using a range of open-source tools (Abbott et al. (2020) <doi:10.12688/wellcomeopenres.16006.1>),
and current best practices (Gostic et al. (2020) <doi:10.1101/2020.06.18.20134858>).
It aims to help users avoid some of the limitations of naive implementations in a framework
that is informed by community feedback and is under active development.

Sam Abbott 

EpiNow2

Estimate Real-Time Case Counts and Time-Varying Epidemiological
Parameters

Sam Abbott

Joel Hellewell

Katharine Sherratt

Katelyn Gostic

Joe Hickson

Hamada S. Badr

Michael DeWitt

Robin Thompson

Sophie Meakin

James Munday

Nikos Bosse

Paul Mee

Peter Ellis

EpiForecasts 

Sebastian Funk

save_input function

Save Observed Data — save_input

Save Observed Data

save_input: Save Observed Data

Description

Usage

Arguments