create_backcalc_data

<a href="https://lifecycle.r-lib.org/articles/stages.html#stable"><img src="figures/lifecycle-stable.svg?package=EpiNow2&version=1.4.0" alt="[Stable]"></a>
Takes the output of <code>backcalc_opts()</code> and converts it into a list understood
by <code>stan</code>.

Estimates the time-varying reproduction number,
rate of spread, and doubling time using a range of open-source tools
(Abbott et al. (2020) <doi:10.12688/wellcomeopenres.16006.1>), and
current best practices (Gostic et al. (2020)
<doi:10.1101/2020.06.18.20134858>). It aims to help users avoid some
of the limitations of naive implementations in a framework that is
informed by community feedback and is actively supported.

Sam Abbott 

EpiNow2

Estimate Real-Time Case Counts and Time-Varying Epidemiological
Parameters

Sam Abbott

Joel Hellewell

Katharine Sherratt

Katelyn Gostic

Joe Hickson

Hamada S. Badr

Michael DeWitt

Robin Thompson

Sophie Meakin

James Munday

Nikos Bosse

Paul Mee

Peter Ellis

Pietro Monticone

Lloyd Chapman

James M. Azam

Andrew Johnson

EpiForecasts 

Sebastian Funk

create_backcalc_data function

<dl><dt>backcalc</dt>
<dd>A list of options as generated by <code>backcalc_opts()</code> to
define the back calculation. Defaults to <code>backcalc_opts()</code>.</dd></dl>

Arguments

Author

<a href='https://lifecycle.r-lib.org/articles/stages.html#stable'><img src='figures/lifecycle-stable.svg' alt='[Stable]' /></a>
Takes the output of <code>backcalc_opts()</code> and converts it into a list understood
by <code>stan</code>.

Create Back Calculation Data — create_backcalc_data

<dl>

<dt>backcalc</dt>
<dd>A list of options as generated by <code>backcalc_opts()</code> to
define the back calculation. Defaults to <code>backcalc_opts()</code>.</dd>

</dl>

Create Back Calculation Data

create_backcalc_data: Create Back Calculation Data

Description

Usage

Value

Arguments

Author

See Also

Examples