apply_default_cdf_cutoff

Apply default CDF cutoff to a &lt;dist_spec&gt; if it is unconstrained

internal

Estimates the time-varying reproduction number,
rate of spread, and doubling time using a range of open-source tools
(Abbott et al. (2020) <doi:10.12688/wellcomeopenres.16006.1>), and
current best practices (Gostic et al. (2020)
<doi:10.1101/2020.06.18.20134858>). It aims to help users avoid some
of the limitations of naive implementations in a framework that is
informed by community feedback and is actively supported.

Sebastian Funk

EpiNow2

Estimate Real-Time Case Counts and Time-Varying Epidemiological
Parameters

Sam Abbott

Joel Hellewell

Katharine Sherratt

Katelyn Gostic

Joe Hickson

Hamada S. Badr

Michael DeWitt

James M. Azam

Robin Thompson

Sophie Meakin

James Munday

Nikos Bosse

Paul Mee

Peter Ellis

Pietro Monticone

Lloyd Chapman

Andrew Johnson

Kaitlyn Johnson

EpiForecasts 

apply_default_cdf_cutoff function

<dl><dt>dist</dt>
<dd>A &lt;dist_spec&gt;</dd>
<dt>default_cdf_cutoff</dt>
<dd>Numeric; default CDF cutoff to be used if an
unconstrained distribution is passed as <code>dist</code>. If <code>dist</code> is already
constrained by having a maximum or CDF cutoff this is ignored.</dd>
<dt>cdf_cutoff_set</dt>
<dd>Logical; whether the default CDF cutoff has been set by
the user; if yes and <code>dist</code> is constrained a warning is issued</dd></dl>

Arguments

Apply default CDF cutoff to a &lt;dist_spec&gt; if it is unconstrained — apply_default_cdf_cutoff

<dl>

<dt>dist</dt>
<dd>A &lt;dist_spec&gt;</dd>


<dt>default_cdf_cutoff</dt>
<dd>Numeric; default CDF cutoff to be used if an
unconstrained distribution is passed as <code>dist</code>. If <code>dist</code> is already
constrained by having a maximum or CDF cutoff this is ignored.</dd>


<dt>cdf_cutoff_set</dt>
<dd>Logical; whether the default CDF cutoff has been set by
the user; if yes and <code>dist</code> is constrained a warning is issued</dd>

</dl>

Apply default CDF cutoff to a &lt;dist_spec&gt; if it is unconstrained

apply_default_cdf_cutoff: Apply default CDF cutoff to a <dist_spec> if it is unconstrained

Description

Usage

Value

Arguments