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EpidigiR (version 0.1.2)

Digital Epidemiological Analysis and Visualization Tools

Description

Integrates methods for epidemiological analysis, modeling, and visualization, including functions for summary statistics, SIR (Susceptible-Infectious-Recovered) modeling, DALY (Disability-Adjusted Life Years) estimation, age standardization, diagnostic test evaluation, NLP (Natural Language Processing) keyword extraction, clinical trial power analysis, survival analysis, SNP (Single Nucleotide Polymorphism) association, and machine learning methods such as logistic regression, k-means clustering, Random Forest, and Support Vector Machine (SVM). Includes datasets for prevalence estimation, SIR modeling, genomic analysis, clinical trials, DALY, diagnostic tests, and survival analysis. Methods are based on Gelman et al. (2013) and Wickham et al. (2019, ISBN:9781492052040>.

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Version

Install

install.packages('EpidigiR')

Monthly Downloads

157

Version

0.1.2

License

MIT + file LICENSE

Maintainer

Esther Atsabina Wanjala

Last Published

November 5th, 2025

Functions in EpidigiR (0.1.2)

nlp_data

NLP Data for Epidemiological Text Analysis
sir_data

SIR Model Simulation Data
epi_analyze

Performs summary statistics, SIR modeling, DALY calculation, age standardization, diagnostic test evaluation, or NLP keyword extraction.
daly_data

DALY Data for Global Health Burden
epi_visualize

Flexible Epidemiological Visualization
epi_model

Unified Epidemiological Modeling
survival_data

Survival Analysis Data
survey_data

Survey Data for Age Standardization
epi_prevalence

Disease Prevalence Data by Region and Age Group
ml_data

Machine Learning Data for Disease Risk Prediction
geno_data

Genomic SNP-Case Data
EpidigiR-package

EpidigiR: Digital Epidemiological Analysis and Visualization Tools
diagnostic_data

Diagnostic Test Data for Evaluation
clinical_data

Clinical Trials Data for Epidemiological Analysis