preprocessing

exp_data

normal_snp

tumor_snp

<p>a string, file path of the files above</p>

f_path

<p>Takes <code>exp_data</code>, <code>normal_snp</code>, and <code>tumor_snp</code></p>

internal

Includes R functions for the estimation of tumor clones percentages for both snp data and (whole) genome sequencing data. See Cheng, Y., Dai, J. Y., Paulson, T. G., Wang, X., Li, X., Reid, B. J., & Kooperberg, C. (2017). Quantification of multiple tumor clones using gene array and sequencing data. The Annals of Applied Statistics, 11(2), 967-991, <doi:10.1214/17-AOAS1026> for more details.

Xuan You

EstMix

Tumor Clones Percentage Estimations

preprocessing function

Preprocessing data — preprocessing

Preprocessing data

preprocessing: Preprocessing data

Description

Usage

Arguments

Value