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EurosarcBayes (version 1.1)

Bayesian Single Arm Sample Size Calculation Software

Description

Bayesian sample size calculation software and examples for EuroSARC clinical trials which utilise Bayesian methodology. These trials rely on binomial based endpoints so the majority of programs found here relate to this sort of endpoint. Developed as part of the EuroSARC FP7 grant.

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Version

Install

install.packages('EurosarcBayes')

Monthly Downloads

33

Version

1.1

License

GPL-2

Maintainer

Peter Dutton

Last Published

November 15th, 2017

Functions in EurosarcBayes (1.1)

bayes_binom_one_postprob_nstage

Single arm, any stage, cut-point calculator using posterior probabilities to make the cuts.
bayes_binom_one_postprob_onestage

Bayesian single-arm single-endpoint minimum sample size
bayes_binom_two_postprob

Bayesian, single arm, two endpoint trial design, using posterior probability to make decisions.
EurosarcBayes-package

Bayesian sample size calculation software
print.list_trialDesign_binom_two

Bayesian, single arm, two endpoint trial design, using posterior probability to make decisions.
binom_one_alpha

Single arm, exact p-value calculator for single or multi-stage binomial trials.
bayes_binom_two_loss

Bayesian, single arm, two endpoint trial designs, using loss functions to make decisions
binom_one_power

Single arm, power calculator for single or multi-stage binomial trials.
bayes_binom_two_postlike

Bayesian, single arm, two endpoint trial designs.
freq_binom_one_onestage

Bayesian single-arm single-endpoint minimum sample size
freq_binom_one_landemets

Single arm, two stage, Binomial sample size calculator
binom_one_assurance

Single arm, assurance calculator for single or multi-stage binomial trials.
freq_binom_two_singlestage

Frequentist single-arm two-endpoint trial sample size
trialDesign_binom_two-class

Class "trialDesign_binom_two"
binom_two_singlestage-class

Class "binom_two_singlestage"
bayes_binom_one_postlike_nstage

Single arm, any stage, cut-point calculator us posterior predictive distribution of a successful trial occurring to make the cuts.
binom_two_bryantday-class

Class "binom_two_bryantday"
trialDesign_binom_one-class

Class "trialDesign_binom_one"
properties-methods

~~ Methods for Function properties in Package EurosarcBayes ~~
freq_binom_one_simons_twostage

Single arm, two stage, Binomial sample size calculator
properties_binom_one

Properties for single-arm single binomial endpoint trial design
freq_binom_two_bryantday_twostage

Single arm, two independent endpoint extension to Simons two-stage design
tradeoff square

Functions for integration for Bayesian loss methodology
shiny_LINES_posterior

LINES prior-posterior distribution with posterior probabilities
tradeoff ellipse_integrate

Functions for integration for Bayesian loss methodology
tradeoff linear

Functions for integration for Bayesian loss methodology
tradeoff ratio

Functions for integration for Bayesian loss methodology