ExomeDepth (version 0.6.3)

AddAnnotations: Add annotation data to an exome dataset (i.e. position and names of the exons)

Description

Takes the positions of the exons and the names and include this information into a ExomeDepth object.

Usage

AddAnnotations(x, name, chromosome, start, end)

Arguments

x

An ExomeDepth object.

name

Names of the exons(character).

chromosome

Chromosome information for each exon (factor).

start

(numeric) Start of the exons.

end

(numeric) End of the exons.

Value

• The same ExomeDepth object with the annotation data frame added.

Details

Unlikely to be used directly but rather as a subroutine of the CallCNVs function.