exons.hg19

Exon position extracted from the ensembl database version 71.

datasets

Calls copy number variants (CNVs) from targeted sequence data, typically exome sequencing experiments designed to identify the genetic basis of Mendelian disorders.

Vincent Plagnol

ExomeDepth

Calls Copy Number Variants from Targeted Sequence Data

exons.hg19 function

A data frame with 192,379 observations on the following 4 variables.<dl class="dl-horizontal">
 <dt><code>chromosome</code></dt><dd>a factor with levels <code>1</code> <code>10</code> <code>11</code> <code>12</code> <code>13</code> <code>14</code> <code>15</code> <code>16</code> <code>17</code> <code>18</code> <code>19</code> <code>2</code> <code>20</code> <code>21</code> <code>22</code> <code>3</code> <code>4</code> <code>5</code> <code>6</code> <code>7</code> <code>8</code> <code>9</code></dd>
 <dt><code>start</code></dt><dd>a numeric vector</dd>
 <dt><code>end</code></dt><dd>a numeric vector</dd>
 <dt><code>name</code></dt><dd>A character vector of names for the exon(s)</dd>
 </dl>

Format

Positions of exons on build hg19 of the human genome — exons.hg19

A data frame with 192,379 observations on the following 4 variables.<dl class='dl-horizontal'>
 <dt><code>chromosome</code></dt><dd>a factor with levels <code>1</code> <code>10</code> <code>11</code> <code>12</code> <code>13</code> <code>14</code> <code>15</code> <code>16</code> <code>17</code> <code>18</code> <code>19</code> <code>2</code> <code>20</code> <code>21</code> <code>22</code> <code>3</code> <code>4</code> <code>5</code> <code>6</code> <code>7</code> <code>8</code> <code>9</code></dd>
 <dt><code>start</code></dt><dd>a numeric vector</dd>
 <dt><code>end</code></dt><dd>a numeric vector</dd>
 <dt><code>name</code></dt><dd>A character vector of names for the exon(s)</dd>
 </dl>

exons.hg19: Positions of exons on build hg19 of the human genome

Description

Usage

Arguments

Format