genes.hg19

Exon position extracted from the ensembl database version 71.

datasets

Calls copy number variants (CNVs) from targeted sequence data, typically exome sequencing experiments designed to identify the genetic basis of Mendelian disorders.

Vincent Plagnol

ExomeDepth

Calls Copy Number Variants from Targeted Sequence Data

genes.hg19 function

A data frame with 18,033 observations on the following 4 variables.<dl class="dl-horizontal">
 <dt><code>chromosome</code></dt><dd>a factor with levels <code>1</code> <code>10</code> <code>11</code> <code>12</code> <code>13</code> <code>14</code> <code>15</code> <code>16</code> <code>17</code> <code>18</code> <code>19</code> <code>2</code> <code>20</code> <code>21</code> <code>22</code> <code>3</code> <code>4</code> <code>5</code> <code>6</code> <code>7</code> <code>8</code> <code>9</code></dd>
 <dt><code>start</code></dt><dd>a numeric vector</dd>
 <dt><code>end</code></dt><dd>a numeric vector</dd>
 <dt><code>name</code></dt><dd>A character vector of names for the gene(s)</dd>
 </dl>

Format

Positions of genes on build hg19 of the human genome — genes.hg19

A data frame with 18,033 observations on the following 4 variables.<dl class='dl-horizontal'>
 <dt><code>chromosome</code></dt><dd>a factor with levels <code>1</code> <code>10</code> <code>11</code> <code>12</code> <code>13</code> <code>14</code> <code>15</code> <code>16</code> <code>17</code> <code>18</code> <code>19</code> <code>2</code> <code>20</code> <code>21</code> <code>22</code> <code>3</code> <code>4</code> <code>5</code> <code>6</code> <code>7</code> <code>8</code> <code>9</code></dd>
 <dt><code>start</code></dt><dd>a numeric vector</dd>
 <dt><code>end</code></dt><dd>a numeric vector</dd>
 <dt><code>name</code></dt><dd>A character vector of names for the gene(s)</dd>
 </dl>

genes.hg19: Positions of genes on build hg19 of the human genome

Description

Usage

Arguments

Format