Usage
ExperimentHubMetadata(ExperimentHubRoot=NA_character_,
BiocVersion=biocVersion(),
SourceUrl=NA_character_,
SourceType=NA_character_,
SourceVersion=NA_character_,
SourceLastModifiedDate=as.POSIXct(NA_character_),
SourceMd5=NA_character_,
SourceSize=NA_real_,
DataProvider=NA_character_,
Title=NA_character_,
Description=NA_character_,
Maintainer=NA_character_,
Species=NA_character_,
TaxonomyId=NA_integer_,
Genome=NA_character_,
Tags=NA_character_,
RDataClass=NA_character_,
RDataDateAdded=as.POSIXct(NA_character_),
RDataPath=NA_character_,
Coordinate_1_based=TRUE,
Notes=NA_character_,
DispatchClass=NA_character_,
PreparerClass=NA_character_,
Location_Prefix='http://s3.amazonaws.com/experimenthub/')Arguments
ExperimentHubRoot
character(1) Prefix of the local path to resources to be added
to ExperimentHub. Currently not used.
SourceUrl
character(1) TBD
SourceType
character(1) TBD
SourceVersion
character(1) TBD
SourceLastModifiedDate
POSIXct() Date when resource was last modified
SourceMd5
character(1) md5 hash of original file
SourceSize
numeric(1) Number of bytes in original file
DataProvider
character(1) Original data provider
Title
character(1) Title for this resource
Description
character(1) Description of the resource
Species
character(1) Species name
TaxonomyId
character(1) NCBI code
Genome
character(1) Name of genome build
Tags
character() Free-form tags for search. biocViews from DESCRIPTION
are added to the Tags.
RDataClass
character(1) Class of derived object (e.g. GRanges)
RDataDateAdded
POSIXct() Date added to ExperimentHub; used to determine snapshots.
RDataPath
character(1) file path to serialized form
Maintainer
character(1) Maintainer name and email address,
A Maintainer a.maintainer@email.addr
BiocVersion
character() Under which resource was built
Coordinate_1_based
logical(1) Do coordinates start with 1 or 0?
Location_Prefix
character(1) URL location of AWS S3 bucket.
Notes
character() Notes about the resource.
DispatchClass
character(1) Used internally.
PreparerClass
character(1) Used internally.