if (FALSE) {
# generate data
set.seed(1234)
n <- 500
samp <- evd::rfrechet(n,0,1:n,4)
# set effective sample size and threshold
k <- 50
threshold <- sort(samp,decreasing = TRUE)[k+1]
# preliminary mle estimates of scale and shape parameters
mlest <- evd::fpot(samp, threshold, control=list(maxit = 500))
# empirical bayes procedure
proc <- estPOT(
samp,
k = k,
pn = c(0.01, 0.005),
type = "continuous",
method = "bayesian",
prior = "empirical",
start = as.list(mlest$estimate),
sig0 = 0.1)
# conditional predictive density estimation
yg <- seq(0, 50, by = 2)
nyg <- length(yg)
# estimation of scedasis function
# setting
M <- 1e3
C <- 5
alpha <- 0.05
bw <- .5
nsim <- 5000
burn <- 1000
# create covariate
# in sample obs
n_in = n
# number of years ahead
nY = 1
n_out = 365 * nY
# total obs
n_tot = n_in + n_out
# total covariate (in+out sample period)
x <- seq(0, 1, length = n_tot)
# in sample grid dimension for covariate
ng_in <- 150
xg <- seq(0, x[n_in], length = ng_in)
# in+out of sample grid
xg <- c(xg, seq(x[n_in + 1], x[(n_tot)], length = ng_in))
# in+out sample grid dimension
nxg <- length(xg)
xg <- array(xg, c(nxg, 1))
# in sample observations
samp_in <- samp[1:n_in]
ssamp_in <- sort(samp_in, decreasing = TRUE, index = TRUE)
x_in <- x[1:n_in] # in sample covariate
xs <- x_in[ssamp_in$ix[1:k]] # in sample concomitant covariate
# estimate scedasis function over the in and out of sample period
res_stat <- apply(
xg,
1,
cpost_stat,
N = nsim - burn,
x = x_in,
xs = xs,
bw = bw,
k = k,
C = C
)
# conditional predictive posterior density
yg <- seq(500, 5000, by = 100)
nyg = length(yg)
# intermediate threshold
predDens_intx <- predDensx(
x = yg,
postsamp = proc$post_sample,
scedasis = res_stat,
threshold = proc$t,
"continuous",
extrapolation = FALSE)
# extreme threshold
predDens_extx <- predDensx(
x = yg,
postsamp = proc$post_sample,
scedasis = res_stat,
threshold = proc$t,
"continuous",
extrapolation = TRUE,
p = 0.001,
k = k,
n = n)
# predictive conditional quantiles
predQuant_intxL <- predQuant_intxU <- predQuant_extxL <- predQuant_extxU <- numeric()
for (i in 1:nxg){
predQuant_intxU[i] <- apply(
array(predDens_intx$preddens[,i], c(1, nyg)),
1,
quantF,
x = yg,
p = c(0.975)
)
predQuant_intxL[i] <- apply(
array(predDens_intx$preddens[,i], c(1, nyg)),
1,
quantF,
x = yg,
p = c(0.025)
)
predQuant_extxU[i] <- apply(
array(predDens_extx$preddens[,i], c(1, nyg)),
1,
quantF,
x = yg,
p = c(0.975)
)
predQuant_extxL[i] <- apply(
array(predDens_extx$preddens[,i], c(1, nyg)),
1,
quantF,
x = yg,
p = c(0.025)
)
}
}
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